MetaSnek is a Python package containing miscellaneous functions for metagenomic pipelines!

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MetaSnek is currently used in Koverage, Hecatomb, Trimnami, and Spae for various tasks such as parsing sequencing reads files. It is intended to perform many common functions often found in metagenomics pipelines and improve interoperability by providing an easy-to-use tool that maintains a standard convention for these common functions.